U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX20822260: UMB5448
1 OXFORD_NANOPORE (MinION) run: 1.5M spots, 2.6G bases, 2.1Gb downloads

Design: DNA Library Preparation
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample: UMB5448
SAMN35366346 • SRS18101102 • All experiments • All runs
Library:
Name: UMB5448-n
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 1.5M spots, 2.6G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR250681411,535,4382.6G2.1Gb2023-06-29

ID:
28253582

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...